1887

Abstract

The mechanisms underlying colistin heteroresistance in are not fully understood. Here, we investigated the role of efflux in colistin-heteroresistant populations of a multidrug-resistant (MDR) clinical isolate.

Three colistin-resistant strain variants isolated from the same clinical sample were studied for the presence of heteroresistance to colistin by drug susceptibility testing, genotyping and drug resistance target mutation analysis. The existence of active efflux was studied by synergism assays with efflux inhibitors, real-time efflux activity measurements and analysis of the mRNA transcriptional levels of selected efflux pump genes in response to colistin.

All of the strain variants belong to the ST218, clonal complex 92, international clonal lineage II. Different colistin susceptibility levels were observed among the three strain variants, indicating that colistin-heteroresistant subpopulations were being selected upon exposure to colistin. No mutations were found in the genes and , which are associated with colistin resistance. The results showed the existence of synergistic interactions between efflux inhibitors and colistin and ethidium bromide. Real-time efflux assays demonstrated that the three strain variants had increased efflux activity that could be inhibited in the presence of the inhibitors. The efflux pump genes , , , , , and were found to be overexpressed in the strain variants in response to colistin exposure.

This study shows that efflux activity contributes to colistin heteroresistance in an MDR clinical isolate. The use of efflux inhibitors as adjuvants of the therapy can resensitize to colistin and prevent the emergence of drug resistance.

Loading

Article metrics loading...

/content/journal/jmm/10.1099/jmm.0.000741
2018-06-01
2024-04-18
Loading full text...

Full text loading...

/deliver/fulltext/jmm/67/6/740.html?itemId=/content/journal/jmm/10.1099/jmm.0.000741&mimeType=html&fmt=ahah

References

  1. Boucher HW, Talbot GH, Bradley JS, Edwards JE, Gilbert D et al. Bad bugs, no drugs: no ESKAPE! an update from the Infectious Diseases Society of America. Clin Infect Dis 2009; 48:1–12 [View Article][PubMed]
    [Google Scholar]
  2. Higgins PG, Dammhayn C, Hackel M, Seifert H. Global spread of carbapenem-resistant Acinetobacter baumannii . J Antimicrob Chemother 2010; 65:233–238 [View Article][PubMed]
    [Google Scholar]
  3. Viehman JA, Nguyen MH, Doi Y. Treatment options for carbapenem-resistant and extensively drug-resistant Acinetobacter baumannii infections. Drugs 2014; 74:1315–1333 [View Article][PubMed]
    [Google Scholar]
  4. Navon-Venezia S, Leavitt A, Carmeli Y. High tigecycline resistance in multidrug-resistant Acinetobacter baumannii . J Antimicrob Chemother 2007; 59:772–774 [View Article][PubMed]
    [Google Scholar]
  5. Vilacoba E, Almuzara M, Gulone L, Traglia GM, Figueroa SA et al. Emergence and spread of plasmid-borne tet(B)::ISCR2 in minocycline-resistant Acinetobacter baumannii isolates. Antimicrob Agents Chemother 2013; 57:651–654 [View Article][PubMed]
    [Google Scholar]
  6. Li J, Rayner CR, Nation RL, Owen RJ, Spelman D et al. Heteroresistance to colistin in multidrug-resistant Acinetobacter baumannii . Antimicrob Agents Chemother 2006; 50:2946–2950 [View Article][PubMed]
    [Google Scholar]
  7. López-Rojas R, Jiménez-Mejías ME, Lepe JA, Pachón J. Acinetobacter baumannii resistant to colistin alters its antibiotic resistance profile: a case report from Spain. J Infect Dis 2011; 204:1147–1148 [View Article][PubMed]
    [Google Scholar]
  8. Rolain JM, Roch A, Castanier M, Papazian L, Raoult D. Acinetobacter baumannii resistant to colistin with impaired virulence: a case report from France. J Infect Dis 2011; 204:1146–1147 [View Article][PubMed]
    [Google Scholar]
  9. Valencia R, Arroyo LA, Conde M, Aldana JM, Torres MJ et al. Nosocomial outbreak of infection with pan-drug-resistant Acinetobacter baumannii in a tertiary care university hospital. Infect Control Hosp Epidemiol 2009; 30:257–263 [View Article][PubMed]
    [Google Scholar]
  10. Kim Y, Bae IK, Lee H, Jeong SH, Yong D et al. In vivo emergence of colistin resistance in Acinetobacter baumannii clinical isolates of sequence type 357 during colistin treatment. Diagn Microbiol Infect Dis 2014; 79:362–366 [View Article][PubMed]
    [Google Scholar]
  11. Baron S, Hadjadj L, Rolain JM, Olaitan AO. Molecular mechanisms of polymyxin resistance: knowns and unknowns. Int J Antimicrob Agents 2016; 48:583–591 [View Article][PubMed]
    [Google Scholar]
  12. Jeannot K, Bolard A, Plésiat P. Resistance to polymyxins in Gram-negative organisms. Int J Antimicrob Agents 2017; 49:526–535 [View Article][PubMed]
    [Google Scholar]
  13. Moffatt JH, Harper M, Harrison P, Hale JD, Vinogradov E et al. Colistin resistance in Acinetobacter baumannii is mediated by complete loss of lipopolysaccharide production. Antimicrob Agents Chemother 2010; 54:4971–4977 [View Article][PubMed]
    [Google Scholar]
  14. Adams MD, Nickel GC, Bajaksouzian S, Lavender H, Murthy AR et al. Resistance to colistin in Acinetobacter baumannii associated with mutations in the PmrAB two-component system. Antimicrob Agents Chemother 2009; 53:3628–3634 [View Article][PubMed]
    [Google Scholar]
  15. Beceiro A, Llobet E, Aranda J, Bengoechea JA, Doumith M et al. Phosphoethanolamine modification of lipid A in colistin-resistant variants of Acinetobacter baumannii mediated by the pmrAB two-component regulatory system. Antimicrob Agents Chemother 2011; 55:3370–3379 [View Article][PubMed]
    [Google Scholar]
  16. Park YK, Ko KS. Effect of carbonyl cyanide 3-chlorophenylhydrazone (CCCP) on killing Acinetobacter baumannii by colistin. J Microbiol 2015; 53:53–59 [View Article][PubMed]
    [Google Scholar]
  17. Cheah SE, Johnson MD, Zhu Y, Tsuji BT, Forrest A et al. Polymyxin resistance in Acinetobacter baumannii: genetic mutations and transcriptomic changes in response to clinically relevant dosage regimens. Sci Rep 2016; 6:26233 [View Article][PubMed]
    [Google Scholar]
  18. Ni W, Li Y, Guan J, Zhao J, Cui J et al. Effects of efflux pump inhibitors on colistin resistance in multidrug-resistant Gram-negative bacteria. Antimicrob Agents Chemother 2016; 60:3215–3218 [View Article][PubMed]
    [Google Scholar]
  19. Yoon EJ, Balloy V, Fiette L, Chignard M, Courvalin P et al. Contribution of the Ade resistance-nodulation-cell division-type efflux pumps to fitness and pathogenesis of Acinetobacter baumannii . MBio 2016; 7:e00697-16 [View Article][PubMed]
    [Google Scholar]
  20. Ling B-D, Zhang L LX-Z. Antimicrobial resistance and drug efflux pumps in Acinetobacter . In XZ Li, Elkins C, Zgurskaya H. (editors) Efflux-Mediated Antimicrobial Resistance in Bacteria: Mechanisms, Regulation and Clinical Implications Switzerland: Springer International Publishing; 2016 pp. 329–358 [Crossref]
    [Google Scholar]
  21. European Committee on Antimicrobial Susceptibility Testing 2017; EUCAST Breakpoint Tables v 7.1. www.eucast.org/clinical_breakpoints/ (accessed December 2017)
  22. Nordmann P, Jayol A, Poirel L. A universal culture medium for screening polymyxin-resistant Gram-negative isolates. J Clin Microbiol 2016; 54:1395–1399 [View Article][PubMed]
    [Google Scholar]
  23. European Committee on Antimicrobial Susceptibility Testing and Clinical and Laboratory Standards Institute 2016; Recommendations for colistin (polymyxin E) MIC testing – joint EUCAST and CLSI recommendation. Available at www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/General_documents/Recommendations_for_MIC_determination_of_colistin_March_2016.pdf (accessed December 2017)
  24. Versalovic J, Koeuth T, Lupski JR. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res 1991; 19:6823–6831 [View Article][PubMed]
    [Google Scholar]
  25. Bartual SG, Seifert H, Hippler C, Luzon MA, Wisplinghoff H et al. Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii . J Clin Microbiol 2005; 43:4382–4390 [View Article][PubMed]
    [Google Scholar]
  26. Liu YY, Wang Y, Walsh TR, Yi LX, Zhang R et al. Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study. Lancet Infect Dis 2016; 16:161–168 [View Article][PubMed]
    [Google Scholar]
  27. Gröblacher B, Kunert O, Bucar F. Compounds of Alpinia katsumadai as potential efflux inhibitors in Mycobacterium smegmatis . Bioorg Med Chem 2012; 20:2701–2706 [View Article][PubMed]
    [Google Scholar]
  28. Paixão L, Rodrigues L, Couto I, Martins M, Fernandes P et al. Fluorometric determination of ethidium bromide efflux kinetics in Escherichia coli . J Biol Eng 2009; 3:18 [View Article][PubMed]
    [Google Scholar]
  29. Viveiros M, Rodrigues L, Martins M, Couto I, Spengler G et al. Evaluation of efflux activity of bacteria by a semi-automated fluorometric system. Methods Mol Biol 2010; 642:159–172 [View Article][PubMed]
    [Google Scholar]
  30. Machado D, Fernandes L, Costa SS, Cannalire R, Manfroni G et al. Mode of action of the 2-phenylquinoline efflux inhibitor PQQ4R against Escherichia coli . PeerJ 2017; 5:e3168 [View Article][PubMed]
    [Google Scholar]
  31. Machado L, Spengler G, Evaristo M, Handzlik J, Molnár J et al. Biological activity of twenty-three hydantoin derivatives on intrinsic efflux pump system of Salmonella enterica serovar Enteritidis NCTC 13349. In Vivo 2011; 25:769–772[PubMed]
    [Google Scholar]
  32. Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔC T method. Methods 2001; 25:402–408 [View Article][PubMed]
    [Google Scholar]
  33. Albur M, Noel A, Bowker K, MacGowan A. Colistin susceptibility testing: time for a review. J Antimicrob Chemother 2014; 69:1432–1434 [View Article][PubMed]
    [Google Scholar]
  34. Poirel L, Jayol A, Nordmann P. Polymyxins: antibacterial activity, susceptibility testing, and resistance mechanisms encoded by plasmids or chromosomes. Clin Microbiol Rev 2017; 30:557–596 [View Article][PubMed]
    [Google Scholar]
  35. Su XZ, Chen J, Mizushima T, Kuroda T, Tsuchiya T. AbeM, an H+-coupled Acinetobacter baumannii multidrug efflux pump belonging to the MATE family of transporters. Antimicrob Agents Chemother 2005; 49:4362–4364 [View Article][PubMed]
    [Google Scholar]
  36. Rinder H. Hetero-resistance: an under-recognised confounder in diagnosis and therapy?. J Med Microbiol 2001; 50:1018–1020 [View Article][PubMed]
    [Google Scholar]
  37. El-Halfawy OM, Valvano MA. Antimicrobial heteroresistance: an emerging field in need of clarity. Clin Microbiol Rev 2015; 28:191–207 [View Article][PubMed]
    [Google Scholar]
  38. de Jonge BL, Chang YS, Xu N, Gage D. Effect of exogenous glycine on peptidoglycan composition and resistance in a methicillin-resistant Staphylococcus aureus strain. Antimicrob Agents Chemother 1996; 40:1498–1503[PubMed]
    [Google Scholar]
  39. El-Halfawy OM, Valvano MA. Chemical communication of antibiotic resistance by a highly resistant subpopulation of bacterial cells. PLoS One 2013; 8:e68874 [View Article][PubMed]
    [Google Scholar]
  40. Hawley JS, Murray CK, Jorgensen JH. Colistin heteroresistance in Acinetobacter and its association with previous colistin therapy. Antimicrob Agents Chemother 2008; 52:351–352 [View Article][PubMed]
    [Google Scholar]
  41. Marchaim D, Levit D, Zigron R, Gordon M, Lazarovitch T et al. Clinical and molecular epidemiology of Acinetobacter baumannii bloodstream infections in an endemic setting. Future Microbiol 2017; 12:271–283 [View Article][PubMed]
    [Google Scholar]
  42. Hung KH, Wang MC, Huang AH, Yan JJ, Wu JJ. Heteroresistance to cephalosporins and penicillins in Acinetobacter baumannii . J Clin Microbiol 2012; 50:721–726 [View Article][PubMed]
    [Google Scholar]
  43. Meletis G, Tzampaz E, Sianou E, Tzavaras I, Sofianou D. Colistin heteroresistance in carbapenemase-producing Klebsiella pneumoniae . J Antimicrob Chemother 2011; 66:946–947 [View Article][PubMed]
    [Google Scholar]
  44. Markova N, Haydoushka I, Michailova L, Ivanova R, Valcheva V et al. Cell wall deficiency and its effect on methicillin heteroresistance in Staphylococcus aureus . Int J Antimicrob Agents 2008; 31:255–260 [View Article][PubMed]
    [Google Scholar]
  45. Coelho T, Machado D, Couto I, Maschmann R, Ramos D et al. Enhancement of antibiotic activity by efflux inhibitors against multidrug resistant Mycobacterium tuberculosis clinical isolates from Brazil. Front Microbiol 2015; 6:330 [View Article][PubMed]
    [Google Scholar]
  46. Lin MF, Lin YY, Lan CY. Contribution of EmrAB efflux pumps to colistin resistance in Acinetobacter baumannii . J Microbiol 2017; 55:130–136 [View Article][PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/jmm/10.1099/jmm.0.000741
Loading
/content/journal/jmm/10.1099/jmm.0.000741
Loading

Data & Media loading...

Supplements

Supplementary File 1

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error